FastQCFastQC Report
Tue 10 May 2022
EGAF00002798084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51977
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA530.10196817823267983No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG530.10196817823267983No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT520.1000442503414972No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)