FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51205
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT690.13475246557953324No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA610.11912899130944243No Hit
CATTGGGGCAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA600.1171760570256811No Hit
CCCTTAACAGTACATAGTACATAAAGTCATTTACCGTACATAGCACATTA520.10155258275559027No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)