FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106225
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTAATAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA1690.1590962579430454No Hit
TTATGGTACCGTGCAATATTCATGGTGGCTGGCAGTAATGTACGAAATAC1470.13838550247116968No Hit
CTATTAAGGGTGGGTAGGTTTGTTGGTATCCTAGTGGGTGAGAGGTGGCT1380.12991292068722052No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG1380.12991292068722052No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG1340.1261473287832431No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1310.12332313485526006No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA1270.11955754295128265No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA1170.11014356319133914No Hit
TAATAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTACAGT1150.10826076723935044No Hit
CTTTAGTAGGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAA1130.10637797128736173No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAAACA1090.10261237938338431No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)