FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002798137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125882
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1520.12074800209720213No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA1490.11836481784528367No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG1460.11598163359336522No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG1410.11200965984016777No Hit
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA1310.1040657123337729No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA1260.10009373858057546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)