FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002798138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125882
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG1590.12630876535167856No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG1530.12154239684784164No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA1400.1112152650895283No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1380.10962647558824931No Hit
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA1260.10009373858057546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)