FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798165

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798165
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74543
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG1120.1502488496572448No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT1110.1489073420710194No Hit
ATATTATGCTTGGCTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT990.1328092510363146No Hit
GTGGATGAGGGGTGGCTTTGGAGTTGCAGTTGATGTATGATAGTTGGAGG950.127443220691413No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC870.11671116000160982No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG840.11268663724293361No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG790.1059790993118066No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA750.100613068966905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)