FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35781
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTC640.17886587853888936No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA480.13414940890416702No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA460.12855985019982671No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT390.1089963947346357No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT380.10620161538246556No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT370.10340683603029541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)