FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37299
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA430.11528459208021663No Hit
CCATGAATATTGTACAGTACCATAAATACTTGACCACCTGTAGTACATAA430.11528459208021663No Hit
ATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAG400.10724148100485267No Hit
ATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGG380.10187940695461004No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)