FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798181

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798181
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14173
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGAACGTAGGTGCGATAAATAATGGGATGGGGCAGGAATCAAAGACAG280.19755873844634164No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA220.15522472306498272No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT220.15522472306498272No Hit
CTTGAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACC220.15522472306498272No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA210.14816905383475623No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT200.14111338460452974No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG200.14111338460452974No Hit
GTAATATTGAACGTAGGTGCGATAAATAATGGGATGGGGCAGGAATCAAA180.12700204614407679No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT170.1199463769138503No Hit
CCTGAAACATCGGCATTATCCTCCTGCTTGCAACTATAGCAACAGCCTTC170.1199463769138503No Hit
GTTGAAATCTCCTAAGTGTAAGTTGGGTGCTTTGTGTTAAGCTACACTCT160.11289070768362379No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC160.11289070768362379No Hit
CCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTC160.11289070768362379No Hit
CCCTAAAGCCCATGTCGAAGCCCCCATCGCTGGGTCAATAGTACTTGCCG150.1058350384533973No Hit
CTTAAACACCCCTCCCCACATCAAGCCCGAATGATATTTCCTATTCGCCT150.1058350384533973No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)