FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55318
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG770.13919519866951083No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT680.1229256299938537No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA620.11207925087674897No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN560.10123287175964424No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)