FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85235
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1170.1372675544084003No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG1120.1314014196046225No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG1120.1314014196046225No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC870.10207074558573356No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC860.100897518624978No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)