FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89043
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1250.14038161337780622No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA1160.13027413721460418No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC1120.12578192558651438No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG1040.11679750233033478No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG1010.11342834360926744No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN950.10669002616713273No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA920.10332086744606539No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)