FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56103
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA660.11764076787337575No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT660.11764076787337575No Hit
CCATGAATATTGTACAGTACCATAAATACTTGACCACCTGTAGTACATAA650.11585833199650644No Hit
GTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAG640.11407589611963709No Hit
GTTGAAATCTCCTAAGTGTAAGTTGGGTGCTTTGTGTTAAGCTACACTCT610.10872858848902911No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT610.10872858848902911No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT590.10516371673529046No Hit
GTGAAGTATAGTACGGATGCTACTTGTCCAATGATGGTAAAAGGGTAGCT580.10338128085842112No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)