FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17519
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN230.1312860323077801No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA220.1255779439465723No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT200.11416176722415664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)