FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24006
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG350.14579688411230526No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT340.14163125885195368No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG330.1374656335916021No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATATTTGAG320.1333000083312505No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN290.12080313255019579No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)