FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83347
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1220.14637599433692874No Hit
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA950.11398130706564123No Hit
CTCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCAC860.10318307797521206No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)