FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57118
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT770.13480864175916524No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG710.12430407227143807No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA660.11555026436499878No Hit
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA650.11379950278371091No Hit

[OK]Adapter Content

Adapter graph