FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43267
Sequences flagged as poor quality0
Sequence length35-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA630.14560750687591004No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG570.13174012526868054No Hit
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA480.11093905285783623No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT450.10400536205422146No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC450.10400536205422146No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)