FastQCFastQC Report
Mon 12 Sep 2022
EGAF00002838533

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002838533
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3942380
Sequences flagged as poor quality0
Sequence length62-76
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG124360.3154439703935186No Hit
GCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGG50390.12781619224935192No Hit

[WARN]Adapter Content

Adapter graph