FastQCFastQC Report
Sun 5 Mar 2023
EGAF00002839352

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002839352
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76277275
Sequences flagged as poor quality0
Sequence length121
%GC45

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14386281.8860505963276744No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2117150.2775597319122897No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA812160.10647470036128061No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)