FastQCFastQC Report
Thu 16 Mar 2023
EGAF00002839364

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002839364
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72654593
Sequences flagged as poor quality0
Sequence length35-121
%GC51

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9172371.2624625121773099No Hit
CAAAGATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAAC892170.1227960908128685No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT830030.11424329360705386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)