FastQCFastQC Report
Fri 22 Apr 2022
EGAF00002854521

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002854521
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559459410
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG2330150.019.612583140-144
GATCGGA1592600.018.848206140-144
TAGATCG1182500.017.21182140-144
ATCGGAA1330050.011.469505140-144
CAGATCG1235700.010.47295140-144
AAGATCG2000500.09.681693140-144
Produced by FastQC (version 0.11.5)