FastQCFastQC Report
Fri 22 Apr 2022
EGAF00002854640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002854640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences331036445
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1057350.025.4053841
TCGGAAG1140300.023.619042
CGGAAGA1266550.021.3446043
TATGCCG550200.010.53852245-49
CGTATGC625750.09.19432245-49
AGAGCAC3251950.08.8543217
AGCACAC3521000.08.3731699
GAGCACA3593650.08.2062058
GAAGAGC3659000.07.9862375
CTCGTAT534000.07.975064340-44
ATGCCGT742500.07.95560945-49
GCCGTCT747000.07.740522450-54
TGCCGTC723600.07.70253545-49
TCTCGTA559550.07.58758740-44
TCGTATG603300.06.63837640-44
CGTCTTC953200.06.4159150-54
CCGTCTT975000.06.226357550-54
ATCTCGT722250.06.145359540-44
CGTCTGA1007050.06.04780815-19
ACACGTC1011800.05.946436410-14
Produced by FastQC (version 0.11.5)