FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002854682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002854682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences404258322
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGCG541450.07.4909725145
TCGCGCA463550.07.1190434145
CTCGCGC599800.06.0108733145
CGCGCAT404600.05.802819145
ACACGTC1968950.05.4489655145
CGTCTGA1809700.05.3259773145
GATCGGA2642750.05.267143145
ATCGGAA2742100.05.0922117145
AGATCGG2789550.05.091583145
Produced by FastQC (version 0.11.5)