FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002854812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002854812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences328007820
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG798300.021.1584979
GAGCGTC1043400.016.285028
ATCGGAA1206900.014.5146751
TCGGAAG1276600.013.63277152
AGAGCGT1283450.013.4312167
CGGAAGA1463300.011.914493
AAGAGCG1667450.010.4774016
CGCCGTA533150.06.469597355-59
TCGCCGT581050.06.008626555-59
TCCGATC276550.05.3474933
GTCGCCG682400.05.330817755-59
GCCGTAT694750.05.256925655-59
GAAGAGC3858200.05.12375
Produced by FastQC (version 0.11.5)