FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002854944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002854944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426248187
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTGGA1696250.06.9349741
ATCGGAA1338200.06.85702751
TCGGAAG1417150.06.5220532
ACGGGAT1284800.05.89580739
CGGAAGA1607600.05.80806163
AACGGGA1695850.05.7062948
AAACGGG2067050.05.57582957
GAAACGG2186850.05.36661776
GGAAACG2260850.05.17822275
Produced by FastQC (version 0.11.5)