FastQCFastQC Report
Fri 22 Apr 2022
EGAF00002854992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002854992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences403990135
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1436350.044.2938161
TCGGAAG1533350.041.4792
CGGAAGA1710750.037.139613
CGCGAAA677900.018.802535-39
TCCGCGA714500.018.13841430-34
CCGCGAA729500.017.2207830-34
AGAGCAC4177600.015.7711017
TATGCCG841550.015.62692845-49
AGCACAC4429050.014.9133759
GAGCACA4583100.014.4563828
CTCCGCG933550.014.14023830-34
GAAGAGC4725200.014.0431175
CGTATGC939000.013.99280345-49
CTCGTAT944250.013.93739840-44
TCTCGTA860500.012.65840240-44
GCGAAAT874550.012.48398635-39
ACTCCGC1071250.012.44987930-34
TCGTATG1054900.012.30366540-44
ATGCCGT1052100.012.269464545-49
TGCCGTC1048900.011.92537345-49
Produced by FastQC (version 0.11.5)