FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002855007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002855007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433439813
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1184850.025.0107129
GAGCGTC1543700.019.3422538
ATCGGAA1875850.016.8465731
AGAGCGT1874300.016.0660387
TCGGAAG1980600.015.9045642
CGGAAGA2241000.014.0855553
AAGAGCG2362250.013.3889236
CGCCGTA525550.010.73834455-59
TCGCCGT574850.09.542459555-59
GTCGCCG683450.08.8981655-59
TCCGATC355350.08.4259943
GCCGTAT752900.07.86936355-59
TGGTCGC860900.07.082409450-54
GGTCGCC909850.06.73643650-54
CCGTATC885850.06.537720755-59
CCGATCT462800.06.45354
GAAGAGC5381200.06.4150065
CGTATCA953150.06.325414760-64
GTGGTCG1019700.06.172841550-54
TTCCGAT555900.05.94698672
Produced by FastQC (version 0.11.5)