FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002855140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002855140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences394628930
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC305650.016.534683
CCGATCT424250.012.2532784
TTCCGAT481950.010.85001852
CTTCCGA608250.08.8989211
CGCCGTA277050.06.803886455-59
CGATCTA274850.06.4363545
CGTCGTG1895850.06.319846145
GCGTCGT1937800.06.2992687145
AGCGTCG2042600.05.7661977145
GTCGTGT2073700.05.595628145
GTCGCCG364000.05.576972555-59
TCGCCGT341350.05.496752755-59
GAGCGTC2388300.05.482211145
TCGTGTA2062600.05.414379145
GTACGTC896200.05.3752465145
TACGTCC978150.05.3557415145
CGTGTAG2041850.05.3555303145
GATCGGA3041050.05.2731314145
GTGTACG1133700.05.1592617145
ATCGGAA3159200.05.011525145
Produced by FastQC (version 0.11.5)