FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002855255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002855255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences381682616
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1309950.047.948051
TCGGAAG1409850.044.4932482
CGGAAGA1541950.040.6562273
AGAGCAC3898900.016.7056487
TATGCCG805400.016.38528645-49
AGCACAC4202500.015.58515559
GAGCACA4338700.015.1475318
GAAGAGC4383150.014.9599555
CGTATGC890900.014.7216745-49
CTCGTAT815400.014.14899340-44
TCTCGTA853700.013.51931240-44
ATGCCGT1027650.012.91216745-49
GCCGTCT1031950.012.67731850-54
TCGTATG883200.012.52613440-44
TGCCGTC1022950.012.49820345-49
CACTCCG1149150.011.51670930-34
ACTCCGG1175300.011.4010730-34
ATCTCGT1037500.011.25002240-44
CCGGAGA1159650.011.06868530-34
CGTCTTC1274300.010.59634250-54
Produced by FastQC (version 0.11.5)