FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002855702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002855702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences331036445
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1129150.023.9572879
GAGCGTC1413350.019.248578
ATCGGAA1647300.017.263081
TCGGAAG1742600.016.2506032
AGAGCGT1712800.016.0142527
CGGAAGA1947850.014.5283873
AAGAGCG2164650.012.9898546
CGCCGTA629750.09.14837455-59
TCGCCGT704800.08.24012155-59
GCCGTAT794400.07.535470555-59
GTCGCCG811950.07.24387755-59
GAAGAGC4206700.07.18913755
TGGTCGC937300.06.531638650-54
CCGTATC907100.06.381619555-59
CGTATCA964900.06.2787360-64
GTGGTCG1015300.06.085548450-54
GGTCGCC982600.05.99587650-54
GCGTCGT1037050.05.58134310-14
CGTCGTG1077500.05.39737710-14
TCTCGGT1299050.05.026603745-49
Produced by FastQC (version 0.11.5)