FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002855783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002855783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences550862297
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG1083550.014.331231140-144
GATCGGA764850.013.819466140-144
TAGATCG526650.010.265974140-144
TCCGATC435150.09.2327283
ATCGGAA846450.06.970805140-144
CCGATCT601050.06.87519654
CAGATCG886750.06.5289774140-144
TTCCGAT701350.06.1490152
Produced by FastQC (version 0.11.5)