FastQCFastQC Report
Tue 19 Apr 2022
EGAF00002855965

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002855965
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437852025
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC321850.014.0563123
CCGATCT452550.010.1889844
TTCCGAT528700.09.1054022
CTTCCGA645900.07.58828451
CGATCTA309350.05.9762725
Produced by FastQC (version 0.11.5)