FastQCFastQC Report
Tue 6 Dec 2022
EGAF00002859992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002859992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences883100021
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCGCTGGTTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT28410710.3217156530902177No Hit
CAGCGCTGGTTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA22285900.2523598626434638No Hit
CAGCGCTGGTTGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC9860220.11165462309506616No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)