FastQCFastQC Report
Thu 17 Nov 2022
EGAF00002860006

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860006
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences804498826
Sequences flagged as poor quality0
Sequence length151
%GC43

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTAAGAGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT32151840.39965055213144585No Hit
GGCTTAAGAGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA22561980.28044764356188134No Hit
GGCTTAAGAGAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC12142480.15093222771216325No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC10878610.1352221985716111No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)