FastQCFastQC Report
Fri 13 May 2022
EGAF00002860019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1014021081
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCACGCAAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT59662890.5883791877498452No Hit
CTCCACGCAAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA42926440.42332887160163485No Hit
CTCCACGCAAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC11322270.11165714611016062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)