FastQCFastQC Report
Fri 13 May 2022
EGAF00002860035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences910010621
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAATGGCGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT43767720.48095834257301484No Hit
CATAATGGCGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA24713320.27157177542436617No Hit
CATAATGGCGAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC10718890.117788625238474No Hit
CATAATGGCGAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC9453420.10388252380627984No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)