FastQCFastQC Report
Fri 13 May 2022
EGAF00002860037

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860037
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences912262170
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCGGAACATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT34731990.380723778121809No Hit
GGCCGGAACATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17937680.19662856347534394No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGAAGCTATCTCGTATG12888440.14128000068226002TruSeq Adapter, Index 19 (97% over 37bp)
GGCCGGAACATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC12084720.1324698140228702No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)