FastQCFastQC Report
Fri 9 Dec 2022
EGAF00002860050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences915678344
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCTCCCAGGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT49773910.5435741745575234No Hit
TACCTCCCAGGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA31990860.3493678780285755No Hit
TACCTCCCAGGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC11600750.12669022999194135No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCTTCGCCTGTGTAGATCTC11501360.1256048051738133Illumina Single End PCR Primer 1 (96% over 31bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)