FastQCFastQC Report
Thu 17 Nov 2022
EGAF00002860057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences950254598
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTTCAAGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT55525320.5843204559795248No Hit
TCACTTCAAGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA37453470.39414142355983633No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGAAGCTATCTCGTATG26063890.2742832295140339TruSeq Adapter, Index 19 (97% over 37bp)
TCACTTCAAGAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC15030630.15817476739007583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)