FastQCFastQC Report
Fri 13 May 2022
EGAF00002860066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1037726069
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAAGAATCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT60311370.5811877700838601No Hit
TGTAAGAATCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA50270610.4844304436568992No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT16934070.16318439428160883Illumina Single End PCR Primer 1 (100% over 50bp)
TGTAAGAATCAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC12402200.11951323543361808No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)