FastQCFastQC Report
Fri 9 Dec 2022
EGAF00002860071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1009260237
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCCGCCGTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT45850090.4542940296180518No Hit
AGGCCCGCCGTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA29383670.2911406684101833No Hit
AGGCCCGCCGTGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC14229300.14098742304855116No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)