FastQCFastQC Report
Tue 8 Nov 2022
EGAF00002860075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1024511792
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCACGCAAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT78956500.770674389660905No Hit
CTCCACGCAAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA57721440.5634043497666252No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCTCGTATG14361350.14017749831814527TruSeq Adapter, Index 7 (97% over 35bp)
CTCCACGCAAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC13976900.13642497928418185No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)