FastQCFastQC Report
Thu 17 Nov 2022
EGAF00002860088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences962753382
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAAGAATCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT63519150.6597655348459737No Hit
TGTAAGAATCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA46386400.48180978501096555No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTCTTCGCCTGTGTAGATCTC21377750.22204803846640758Illumina Single End PCR Primer 1 (96% over 31bp)
TGTAAGAATCAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC15905200.16520534019791167No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)