FastQCFastQC Report
Sat 17 Dec 2022
EGAF00002860098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences990723492
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGAGAGATCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT44622410.45040226016968216No Hit
CCCGAGAGATCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA40039550.40414455015264744No Hit
CCCGAGAGATCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC10647480.10747176266614662No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)