FastQCFastQC Report
Wed 14 Dec 2022
EGAF00002860102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences917139952
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCCCCCTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT40306090.4394758936420207No Hit
GAATCCCCCTAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC19793120.21581351850213587No Hit
GAATCCCCCTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA19770780.2155699351760439No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)