FastQCFastQC Report
Mon 30 May 2022
EGAF00002860110

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860110
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1050597835
Sequences flagged as poor quality0
Sequence length151
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCCTTCGATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT29273690.2786384002019193No Hit
GGTCCTTCGATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA24165210.2300138948982319No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT10872130.10348517422939484Illumina Single End PCR Primer 1 (100% over 50bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)