FastQCFastQC Report
Fri 13 May 2022
EGAF00002860129

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860129
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences965716845
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGTAAATTACGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT78498390.8128509967121885No Hit
CCGTAAATTACTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA53281640.5517314964097991No Hit
CCGTAAATTACGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC20414980.21139716165974096No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATG11693060.12108166136420662TruSeq Adapter, Index 6 (97% over 35bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)