FastQCFastQC Report
Tue 8 Nov 2022
EGAF00002860133

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860133
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences988743722
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGAGAGATCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT71765520.7258252912578291No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCTCGCGCATCTCGTATG63167370.6388649413846796TruSeq Adapter, Index 8 (97% over 35bp)
CCCGAGAGATCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA45228990.4574389601029497No Hit
CCCGAGAGATCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC21901190.22150522438412001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)