FastQCFastQC Report
Tue 6 Dec 2022
EGAF00002860140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002860140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences934278154
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCTGGGTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26843240.28731529133025197No Hit
ACTCCTGGGTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16285860.17431489680320622No Hit
ACTCCTGGGTAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC10404280.11136169625132859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)